PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do024232.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 303aa    MW: 31067.1 Da    PI: 5.5085
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do024232.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.62.4e-07278298525
                 CHHHCHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKk 25 
                 +r+rr++kNRe+A rsR+RK+
  Do024232.1 278 RRQRRMIKNRESAARSRARKQ 298
                 79******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-5276298No hitNo description
CDDcd147074.14E-13278299No hitNo description
PROSITE patternPS000360281296IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MDLKDGERRG PAGPLSRQGS IYSLTFDEFQ STLGGMGGGL GKEFGSMNMD ELLRSIWTAE  60
ESQAMASASA SAAGAGAAGE DGAALQRQGS LTLPRTLSVK TVDEVWRDFV REGPPPGTAG  120
GAEPQPNRQP TLGEMTLEEF LVRAGVVRDN PAAAAMAVAA AAVPAQPVAP RPIQAVSNGA  180
SIFFGNFGGA SDAGAGAMGF APVGIEDQAM GNGLMPGVAG MAGAAVTVSP VDTSVAQLDS  240
VGKGNGDLSS PMAPVPYPFE GVIRGRRSGA GLEKVVERRQ RRMIKNRESA ARSRARKQVI  300
LLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0370590.0BT037059.1 Zea mays full-length cDNA clone ZM_BFb0153F06 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004973666.11e-147PREDICTED: bZIP transcription factor TRAB1
SwissprotQ6ZDF31e-95TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLK3YI351e-148K3YI35_SETIT; Uncharacterized protein
STRINGSi013904m1e-147(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19290.14e-31ABRE binding factor 4